PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g09880.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 83aa    MW: 9373.42 Da    PI: 4.6797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g09880.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.95.1e-081243356
             AP2 33 lgkfgtaeeAakaaiaarkklege 56
                    lg+f taeeAa+a+++a+ +++g+
  Vang06g09880.3  1 LGTFNTAEEAARAYDRAAYAMRGP 24
                    79*******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.023131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.9E-14133IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-10132IPR016177DNA-binding domain
PfamPF008471.2E-4123IPR001471AP2/ERF domain
SMARTSM003800.0017137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    Send to blast
LGTFNTAEEA ARAYDRAAYA MRGPFAILNF PEEYPMTAGA RHANVEARGR SDQGRQVFEF  60
EYLDDKLLEE LLDFEDKKKR GP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-66AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014513046.16e-29PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC54e-21ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A0S3SPD11e-29A0A0S3SPD1_PHAAN; Uncharacterized protein
STRINGGLYMA20G34550.16e-26(Glycine max)